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Historical documents

- Letter from Charles Miller to Paul A. Marks
This letter, written from Charles Miller, then Assistant Secretary of Health and Human Services, to Paul A. Marks, then Vice President for Health Services at Columbia University, rejects Columbia University.s request to exclusively license the co-transformation technology. Because the patent application pre-dated Bayh-Dole, matters like these were still up to NIH's discretion.
- Letter from Robert Cook-Deegan M.D. and Alessandra Colaianni, B.A., to Columbia University President Lee Bollinger
This letter was an attempt to obtain year-by-year licensing and revenue data from Columbia University. Previous attempts to obtain these data through the Freedom of Information Act from NIH were unsuccessful. View letter.
- Raw Data from Stanford's Office of Technology Licensing
These are data and figures detailing the number of licensees per year, revenue per year, and evolving types of license arrangement.
- 1986 MacroMolecules, Genes, and Computers Symposium and Matrix Workshop Report
This 1986 document discusses two meetings addressing genes and computers. View document.
- Aspen Center for Physics Directory
A list of participants and addresses in the Aspen Center for Physics. View list.
- Brookhaven National Laboratory Letter from Joshua Lederberg 1-9-79
This letter invites Dr. Joshua Lederberg, then the president of Rockefeller University in NY, to participate in an NSF-sponsored workshop on the applicability of computers to analyze nucleic acid sequence information. View letter.
- Tentative Program: Computational Analyis of DNA sequences
This is a list of potential speakers and subjects for the NSF’s sponsored workshop on the applicability of computers to analyze nucleic acid sequence information. View list.
- 1986 System Development Foundation Annual Report
This foundation gave a grant to Michael Waterman, a computer scientist/biologist/mathematician at USC “to study pattern analysis with principal application to molecular biology.” View report.
- Molecular Genetics Program Participants Physics 1982
This is a list of participants in the Molecular Genetics Workshop. Margaret Dayhoff, Michael Waters, and Norton Zinder are among the participants. View list.
- Correspondence between Robert Cook-Deegan and Michael Waters
Three letters written between Michael Waters and Robert Cook-Deegan on the subject of DNA sequencing databases and the other BLAST historical documents provided here. Letter 1. Letter 2. Letter 3.

Cetus vs. Dupont

- Cetus vs. DuPont Court Documents
In 1989, the American chemical giant DuPont filed suit against Cetus, alleging the core PCR patents were not novel because the processes had been previously described on at least three occasions in the 1970’s. Despite strong witnesses on their side, DuPont was not able to prove that the PCR invention had been obvious, and in 1991 the jury voted in favor of Cetus. Transcript index.
- Pretrial discussion with judge and counsels Part I
Discussion of trial logistics with the judge and lawyers for both sides. Full text.
- Pretrial discussion with judge and counsels Part II
Discussion of trial logistics with the judge and lawyers for both sides. Full text.
- Jury Instructions
The judge gives instructions to the jury for how to listen to the trial and come to a conclusion. Full text.
- Plaintiff Opening Statements
Tony Figg was the lead lawyer for DuPont. Full text.
- Defense Opening Statements
Lynn Pasahow was the lead lawyer for Cetus Corporaton. Full text.
- Testimony of Joseph Di Grandi
DeGrandi was a patent lawyer for a DC firm and a witness for the plaintiff. Full text.
- Testimony of Arthur Kornberg Part I
Arthur Kornberg was a professor of biochemistry and a research scientist at Stanford University at the time of the trial. He was a witness for the plaintiff. Full text.
- Testimony of Arthur Kornberg Part II
Arthur Kornberg was a professor of biochemistry and a research scientist at Stanford University at the time of the trial. He was a witness for the plaintiff. Full text.
- Testimony of Arthur Kornberg Part III
Arthur Kornberg was a professor of biochemistry and a research scientist at Stanford University at the time of the trial. He was a witness for the plaintiff. Full text.
- Testimony of Arthur Kornberg Part IV
Arthur Kornberg was a professor of biochemistry and a research scientist at Stanford University at the time of the trial. He was a witness for the plaintiff. Full text.
- Testimony of Robert Bruce Wallace, Part I
Bruce Wallace was a research scientist at the City of Hope Medical Center in Duarte, California. He was a witness for the plaintiff. Full text.
- Testimony of Robert Bruce Wallace, Part II
Bruce Wallace was a research scientist at the City of Hope Medical Center in Duarte, California. He was a witness for the plaintiff. Full text.
- Testimony of Robert Bruce Wallace, Part III
Bruce Wallace was a research scientist at the City of Hope Medical Center in Duarte, California. He was a witness for the plaintiff. Full text.
- Testimony of Ruth Kleppe Aatvaag
Ruth Kleppe was a co-author on a paper that the plaintiff felt demonstrated prior art and therefore invalidated the Cetus PCR patents. She was a witness for the plaintiff. Full text.
- Testimony of Ian Molineux Part I
Ian Molineux was a professor of Microbiology at the University of Texas at Austin, had worked with Ruth Kleppe when she was a postdoc, and was a witness for the plaintiff. Full text.
- Testimony of Ian Molineux Part II
Ian Molineux was a professor of Microbiology at the University of Texas at Austin, had worked with Ruth Kleppe when she was a postdoc, and was a witness for the plaintiff. Full text.
- Testimony of Johan Van de Sande Part I
Johan Herbert Van de Sande, professor and head of the Department of Medical Biochemistry and Effective Medicine at the University of Calgary, Canada, was also a witness for the plaintiff.
- Testimony of William Gerber
William Grant Gerber was at the time of the trial, the senior vice-president at Cetus Corporation, and General Manager of the PCR Division at Cetus Corporation. He was a witness for the defense. Full text.
- Testimony of John Joseph Sninsky
John Joseph Sninsky was, at the time of the trial, the senior director of the Diagnostics Research Program at Cetus Corporation. He was a witness for the defense. Full text.
- Testimony of Jeffrey Miller
Jeffrey Allan Miller was a researcher for the DuPont Merc Pharmaceutical Company, at the time of the trial. He had been working for the pharmaceutical company before it was acquired by DuPont, and was a witness for the defense. Full text.
- Testimony of Johan Van de Sande Part I Recalled
Johan Herbert Van de Sande, professor and head of the Department of Medical Biochemistry and Effective Medicine at the University of Calgary, Canada, was also a witness for the plaintiff. He was called back to continue his testimony. Full text.
- Testimony of Johan Van de Sande Part II Recalled
Johan Herbert Van de Sande, professor and head of the Department of Medical Biochemistry and Effective Medicine at the University of Calgary, Canada, was also a witness for the plaintiff. He was called back to continue his testimony. Full text.
- Testimony of Joseph Oliver Falkinham III, Part I
Joseph Oliver Falkinham, III, was an associate professor of microbiology at Virginia Polytechnic Institute and State University. He was a witness for the plaintiff. Full text.
- Testimony of Joseph Oliver Falkinham III, Part II
Joseph Oliver Falkinham, III, was an associate professor of microbiology at Virginia Polytechnic Institute and State University. He was a witness for the plaintiff. Full text.
- Testimony of Hamilton Othanel Smith Part I
Hamilton Smith was a professor of Molecular Biology and Genetics at Johns Hopkins Medical School. He was a witness for the plaintiff. Full text.
- Testimony of Hamilton Othanel Smith Part II
Hamilton Smith was a professor of Molecular Biology and Genetics at Johns Hopkins Medical School. He was a witness for the plaintiff. Full text.
- Testimony of Hamilton Othanel Smith Part III
Hamilton Smith was a professor of Molecular Biology and Genetics at Johns Hopkins Medical School. He was a witness for the plaintiff. Full text.
- Testimony of Kary Mullis Part I
Kary Mullis was the inventor of PCR, who was an employee at Cetus Corporation when he made his breakthrough discovery. He was a witness for the defense. Full text.
- Testimony of Kary Mullis Part II
Kary Mullis was the inventor of PCR, who was an employee at Cetus Corporation when he made his breakthrough discovery. He was a witness for the defense. Full text.
- Testimony of Kary Mullis Part III
Kary Mullis was the inventor of PCR, who was an employee at Cetus Corporation when he made his breakthrough discovery. He was a witness for the defense. Full text.
- Testimony of Kary Mullis Part IV
Kary Mullis was the inventor of PCR, who was an employee at Cetus Corporation when he made his breakthrough discovery. He was a witness for the defense. Full text.
- Testimony of Rudolph Anderson Part I
Rudolph Anderson was a former patent attorney. He was a witness for the defense. Full text.
- Testimony of Rudolph Anderson Part II
Rudolph Anderson was a former patent attorney. He was a witness for the defense. Full text.
- Testimony of James Eric Dahlberg part I
James Eric Dahlberg was a professor of physiological chemistry at the University of Wisconsin. He was a witness for the defense. Full text.
- Testimony of James Eric Dahlberg part II
James Eric Dahlberg was a professor of physiological chemistry at the University of Wisconsin. He was a witness for the defense. Full text.
- Testimony of James Eric Dahlberg part III
James Eric Dahlberg was a professor of physiological chemistry at the University of Wisconsin. He was a witness for the defense. Full text.
- Testimony of French Anderson
French Anderson was a doctor at the NIH, the Chief of the Molecular Hematology branch. He was a witness for the defense. Full text.
- Testimony of Henry Erlich Part I
Henry Anthony Erlich was the chairman of the Human Genetics Department at Cetus Corporation. He was a witness for the defense. Full text.
- Testimony of Henry Erlich Part II
Henry Anthony Erlich was the chairman of the Human Genetics Department at Cetus Corporation. He was a witness for the defense. Full text.
- Testimony of Bruce Wallace Recalled
Bruce Wallace was a research scientist at the City of Hope Medical Center in Duarte, California. He was a witness for the plaintiff. Full text.
- Testimony of Ian Molineux Recalled
Ian Molineux was a professor of Microbiology at the University of Texas at Austin, had worked with Ruth Kleppe when she was a postdoc, and was a witness for the plaintiff. Full text.
- Testimony of Arthur Kornberg Recalled
Arthur Kornberg was a professor of biochemistry and a research scientist at Stanford University at the time of the trial. He was a witness for the plaintiff. Full text.
- Testimony of James Eric Dahlberg Recalled
James Eric Dahlberg was a professor of physiological chemistry at the University of Wisconsin. He was a witness for the defense. Full text.
- Testimony of Kary Mullis Recalled
Kary Mullis was the inventor of PCR, who was an employee at Cetus Corporation when he made his breakthrough discovery. He was a witness for the defense. Full text.
- Open Court Part I
The jury wasn’t present for the discussions held in open court with the lawyers and judge. Full text.
- Open Court Part II
The jury wasn’t present for the discussions held in open court with the lawyers and judge. Full text.
- Open Court Part III
The jury wasn’t present for the discussions held in open court with the lawyers and judge. Full text.
- Jury Instructions
The judge gives the jury instructions for how to come to a verdict. Full text.
- Plaintiff Closing Arguments
Tony Figg, lead lawyer for Cetus Corporation, gives his closing arguments. Full text.
- Defense Closing Arguments
Lynn Pasahow, lead lawyer for Cetus Corporation, gives his closing arguments. Full text.
- Plaintiff Closing Arguments II
Tony Figg, lead lawyer for Cetus Corporation, gives his closing arguments Full text.
- Jury instructions
The judge gives the jury instructions for how to come to a verdict. Full text.
- Verdict
The judge reads the verdict. Full text.
- Deposition of Tom White
Tom White was an employee at Roche Diagnostics, who had previously been an employee of Cetus Corporation. He was a close friend of Kary Mullis. The plaintiff’s lawyer, Figg, interviews Tom White in this document. Full text.